Section Ⅰ Array Platforms 1 The Affymetrix GeneChip Platform:An Overview 2 The Agilent In Situ Synthesized Microarray Platform 3 Illumina Universal Bead Arrays 4 Microarray Oligonucleotide-probes 5 Automated Liquid Handling and High-Throughput Preparation of Polymerase Chain Reaction Amplified DNA for Microarray Fabrication 6 The Printing Process:Tips on Tips 7 Making and Using Spotted DAN Microarrays in an Academic Core Laboratory 8 Printing Your Own Inkjet Microarrays 9 Peptide Nucleic Acid Microarrays Made with(S,S)-trans-Cyclopentane-Constrained Peptide Nucleic Acids Section Ⅱ Wet-Bench Protocols 10 Optimizing Experiment and Analysis Parameters for Spotted Microarrays 11 Sample Labeling:An Overview 12 Genomic DNA as a General Cohybridization Standard for Ratiometric Microarrays 13 Analysis of Sequence Specificities of DNA-Binding Proteins with Protein Binding Microarrays 14 Microarray Analysis of RNA Processing and Modification 15 Mapping the Distribution of Chromatin Proteins by ChIP on Chip 16 DamID:Mapping of In Vivo Protein-Genome Interactions Using Tethered DNA Adenine Methyltransferase Using Tethered DNA-Adenine Methyltransferase 17 Whole-Genome Genotyping 18 Mapping Drosophila Genomic Aberration Breakpoints with Comparative Genome Hybridization on Microarrys 19 Performing Quantitative Reverse-Transcribed Polymerase Chain Reaction Experiments 20 The Application of Tissue Microarrays in the Validation of Microarray Results 21 Mapping Histone Modefications by Nucleosome Immunoprecipitation AUTHOR INDEX SUBJECT INDEX
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